Index A | B | C | D | E | F | H | I | J | K | M | N | O | P | R | S | T | U | V | W A add_element() (in module automol.form) angle() (in module automol.util.vector) arbitrary_unit_perpendicular() (in module automol.util.vector) are_parallel() (in module automol.util.vector) argsort_hydrogen_abstraction() (in module automol.form.reac) argsort_symbols() (in module automol.form) atom_count() (in module automol.form) automol.form module automol.form.reac module automol.inchi_key module automol.util module automol.util.dict_ module automol.util.dict_.multi module automol.util.heuristic module automol.util.matrix module automol.util.ring module automol.util.tensor module automol.util.vector module B best_unit_perpendicular() (in module automol.util.vector) bond_distance() (in module automol.util.heuristic) bond_distance_limit() (in module automol.util.heuristic) breakby() (in module automol.util) build_full_array() (in module automol.util.tensor) by_key() (in module automol.util.dict_) by_key_by_position() (in module automol.util.dict_.multi) by_value() (in module automol.util.dict_) C central_angle() (in module automol.util.vector) compose() (in module automol.util.dict_) cycle() (in module automol.util.ring) cycle_item_to_front() (in module automol.util.ring) cycle_items_to_back() (in module automol.util.ring) cycle_items_to_front() (in module automol.util.ring) cycle_to_optimal_split() (in module automol.util.ring) cycle_to_split() (in module automol.util.ring) D dihedral_angle() (in module automol.util.vector) distance() (in module automol.util.ring) (in module automol.util.vector) E edges() (in module automol.util.ring) electron_count() (in module automol.form) element_count() (in module automol.form) empty_if_none() (in module automol.util.dict_) equal() (in module automol.form) equivalence_partition() (in module automol.util) F filter_by_key() (in module automol.util.dict_) filter_by_value() (in module automol.util.dict_) filter_keys() (in module automol.util.dict_) first_hash() (in module automol.inchi_key) flatten() (in module automol.util) flip_if_left_handed() (in module automol.util.vector) formula_from_symbols() (in module automol.util) from_internals() (in module automol.util.vector) from_string() (in module automol.form) (in module automol.util.tensor) H heavy_atom_count() (in module automol.form) I invert() (in module automol.util.dict_) is_even_permutation() (in module automol.util) is_multidict() (in module automol.util.dict_.multi) is_odd_permutation() (in module automol.util) is_valid_reaction() (in module automol.form.reac) is_vector_like() (in module automol.util.vector) J join() (in module automol.form) join_sequence() (in module automol.form) K keys_by_value() (in module automol.util.dict_) keys_sorted_by_value() (in module automol.util.dict_) M match() (in module automol.form) merge_sequence() (in module automol.util.dict_) module automol.form automol.form.reac automol.inchi_key automol.util automol.util.dict_ automol.util.dict_.multi automol.util.heuristic automol.util.matrix automol.util.ring automol.util.tensor automol.util.vector move_item_to_end() (in module automol.util) move_item_to_front() (in module automol.util) move_items_to_front() (in module automol.util) N normalize() (in module automol.util.ring) O orthogonalize() (in module automol.util.vector) P partner() (in module automol.util) projected_central_angle() (in module automol.util.vector) protonation_indicator() (in module automol.inchi_key) R remove_duplicates_with_order() (in module automol.util) require_vector_like() (in module automol.util.vector) rotator() (in module automol.util.vector) S scale_iterable() (in module automol.util) second_hash() (in module automol.inchi_key) second_hash_with_extension() (in module automol.inchi_key) separate_negatives() (in module automol.util) set_by_key_by_position() (in module automol.util.dict_.multi) sort_by_list() (in module automol.util) sort_value_() (in module automol.util.dict_) sort_vector() (in module automol.form) sorted_sequence() (in module automol.form) sorted_symbols() (in module automol.form) sorted_symbols_in_sequence() (in module automol.form) string() (in module automol.form) (in module automol.util.matrix) (in module automol.util.tensor) (in module automol.util.vector) string2() (in module automol.form) string_submat_3d() (in module automol.util.tensor) string_submat_4d() (in module automol.util.tensor) T transform_items_to_values() (in module automol.util.dict_) transform_keys() (in module automol.util.dict_) transform_values() (in module automol.util.dict_) translate() (in module automol.util) U unique() (in module automol.form) unit_bisector() (in module automol.util.vector) unit_direction() (in module automol.util.vector) unit_norm() (in module automol.util.vector) unit_perpendicular() (in module automol.util.vector) V value_by_unordered_key() (in module automol.util.dict_) value_in_floatkey_dct() (in module automol.util.dict_) value_similar_to() (in module automol.util) values_by_key() (in module automol.util.dict_) values_in_multilevel_dct() (in module automol.util.dict_) values_sorted_by_key() (in module automol.util.dict_) version_indicator() (in module automol.inchi_key) W without() (in module automol.form)